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Longitudinal and Complex Association Testing with MaAsLin3

Using the HUB

Welcome and About
Quickstart the Platform
Account Details 👤
- Reset Password
- Multi Factor Authentication (MFA) Setup
Uploading Sequencing Data
Metadata
Available Data Workflows
Raw Data Storage and Download
Latest Updates
Bioinformatics Services Project Delivery Walkthrough

Navigating the Sample Dashboard

Organize Your Data
Download Your Results

Single Sample Module (Cohorts and Metadata)

Individual Sample Profiling Results
Combined Kingdom Analysis
FASTQC
Filtering
(Meta)Transcriptomic Analysis in the HUB

Comparative Analysis

Create
View

Advanced Statistics Module

MaAsLin2 for Differential Abundance
- Running MaAsLin 2 Workflow
- Viewing the MaAsLin2 Results
MaAsLin3 for Differential Abundance
- Running MaAsLin3 Workflow
- Viewing the MaAsLin3 Results

Bioinformatics

Terms and Definitions
CHAMP™ Human Microbiome Profiling + GBM/GMM/KEGG
KEPLER Host-Agnostic Taxonomic Profiling
FUNCTIONAL Host-Agnostic Profiling
AMR/VF Profiling
16S Amplicon Classification
ITS Amplicon Classification
Host Read Removal Workflow
Database Species Lists

API

CLI Documentation

Technical Appendix

FAQ
Methods for Manuscripts
Bacteria And Fungi Database Updates
Security and IT Documentation
Available Example Datasets
GTDB vs. NCBI Taxonomic Nomenclature

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Longitudinal and Complex Association Testing with MaAsLin3

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Updated 4 days ago