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NCBI SRA Import
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Technical Appendix
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Guides
API
Technical Appendix
Blog
NCBI SRA Import
Navigate to the Upload Page
From anywhere on the app, you can expand the navigation menu by clicking on the hamburger icon
on the upper left side of the screen.
2. Navigate to the SRA Upload
Navigate to the NCBI SRA tab
You have the ability to choose the sample type, and folder location. NCBI SRA import is currently available for SRR shotgun metagenomic samples. 16S Functionality is currently in development.
3. Uploading Multiple Samples
You can provide a comma separated list to upload multiple samples of a single type. If you are using the
SRA Run Selector
Select the “Accession List” that will download a text file.
Open or copy the contents of the text file to your preferred spreadsheet application
Convert the vertical list to a horizontal list. Cutting and Pasting the Transpose of the vertical list is the quickest way to accomplish this task.
Export as a CSV
Open the CSV as a text file
Copy & Paste the contents into the NCBI SRA Upload text field
On this page
Navigate to the Upload Page
2. Navigate to the SRA Upload
3. Uploading Multiple Samples
Assistant
Responses are generated using AI and may contain mistakes.